CDS

Accession Number TCMCG057C31541
gbkey CDS
Protein Id XP_018435460.1
Location complement(join(7524155..7524768,7524771..7525269))
Gene LOC108807706
GeneID 108807706
Organism Raphanus sativus

Protein

Length 371aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018579958.1
Definition PREDICTED: LOW QUALITY PROTEIN: probable F-box protein At5g47300 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description termination of mitochondrial transcription
KEGG_TC 2.A.29.23
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K04499        [VIEW IN KEGG]
ko:K08505        [VIEW IN KEGG]
ko:K14684        [VIEW IN KEGG]
ko:K15032        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04130        [VIEW IN KEGG]
ko04310        [VIEW IN KEGG]
map04130        [VIEW IN KEGG]
map04310        [VIEW IN KEGG]
GOs GO:0001067        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005740        [VIEW IN EMBL-EBI]
GO:0005741        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006914        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016236        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0019867        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031966        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031968        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032543        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034250        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042255        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045727        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061668        [VIEW IN EMBL-EBI]
GO:0061919        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070129        [VIEW IN EMBL-EBI]
GO:0070131        [VIEW IN EMBL-EBI]
GO:0070181        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0140053        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903108        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGATGATGTCGGACCTTCCATGGGATTTGGTCGAAGAGATACTGTGCAGAGTTCCAGCCATATCTCTGAAACGGTTACGATCTTCTTGCAAACGGTGGAACGGTTTATTCAACGATAAGGAATTCGCAAGAAAGCACTTCCATAAAGCACCTAAACAGTCTTTTGTTTTAACGCTGACAAAGGAATTCAAAATCTGTTTGATGAGCCTCAATCTCCATGGAACCCCATCTTTAGAGTTTAAAGGTGCGTGTAGCCTACTCGATTACTCAAATCAAGTCAGCACAGTCTTTCACTGCGACGGTTTGTTGTTATGTACCTTCGATAAAGATGCTAGAATCATGCTTTGGAACCCGTGTACTGGTGGGACCAGGTGGATCCAACCATTTAATGGAAGCTACACATATGCTCTCGGATCCTACCAAGAAAGTAGCTACAAAATATTGAGCCGTGGGGATTCTGTATATGAATTTGCAATATACGAGGTTAATTCTAATTTGAGGATTCTTGATGTGATTAAGGACTTCCGATTACTGTATACCAGTACATACGTGTCTTTGAAGGGAAAGACTTATTGGTTTGCTTCGGATAGTAAAGATGAACAACTCGACATGTTCTTAGTTAGTTTTGATTATACAACAGAGAGGTTTGGACGTCTGAGTCTACCTTTTAACTGTCCTTTAGGTTGTTTTCGAGATGCGGCTCTATCAGTTGTTAGTGAAGAGAAGCTTGCAGTGTTACTACAACGCAAAAATACACGGGGGAAAGATATATGGGTGAGTAATAAAATTGATGGGACTAATGAGTTGTCGTGGAGAAAGATCTTAACAGTGAATTACCCCAGACGTGATATTTGGGTTACTAGAACTCGTTTTTTGCTCAACGAGGAAAAGAAAGTCGCCCTATGTTGTGAGACATGTGTATTCGACCTCAATACCACGATGAAAAAGTTAGTATACGTTGCTGGGGAGGAAGATAATATAGTCAAACTAATGGACTATGTAGAAGTGCAAGTGCAATTCGGACCAATTGTTCTTGATTATGCTCCAAGTTTGATTCAAATTCCTCAAAGCATGGTTGCAAAAGAAAAAAAATTAGAGTTGACTAGGTAA
Protein:  
MTMMSDLPWDLVEEILCRVPAISLKRLRSSCKRWNGLFNDKEFARKHFHKAPKQSFVLTLTKEFKICLMSLNLHGTPSLEFKGACSLLDYSNQVSTVFHCDGLLLCTFDKDARIMLWNPCTGGTRWIQPFNGSYTYALGSYQESSYKILSRGDSVYEFAIYEVNSNSXRILDVIKDFRLLYTSTYVSLKGKTYWFASDSKDEQLDMFLVSFDYTTERFGRLSLPFNCPLGCFRDAALSVVSEEKLAVLLQRKNTRGKDIWVSNKIDGTNELSWRKILTVNYPRRDIWVTRTRFLLNEEKKVALCCETCVFDLNTTMKKLVYVAGEEDNIVKLMDYVEVQVQFGPIVLDYAPSLIQIPQSMVAKEKKLELTR